Tools

The following are tools that have been included in WallaBase to use for exploring the tammar wallaby genome and associated information about it.

• JBrowse
  • This is a genome browser that allows for fast visualization of genomic information, it allows users to easily visualize large datasets without the need to upload them. It supports user supplied GFF3, BED, Wiggle, BigWig, BAM, VCF and REST.
• BLAST
  • A tool for identifying areas of local similarity at varying evolutionary distances.
• Galaxy
• WebApollo
  • A tool to annotate the genome in a central location. Please contact us if you are interested in using this feature.